BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003E02SP1|AL425129
(302 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 593 e-170
>3x_Contig1619
Length = 7770
Score = 593 bits (298), Expect = e-170
Identities = 300/302 (99%)
Strand = Plus / Minus
Query: 1 ggggagcatagaaactataattcaatcggttagaatagtattttgataaggtaccaatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4388 ggggagcatagaaactataattcaatcggttagaatagtattttgataaggtaccaatat 4329
Query: 61 aggttcaattcctattagtttcatatatatttaaatggatggttgactgagtggtttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4328 aggttcaattcctattagtttcatatatatttaaatggatggttgactgagtggtttaag 4269
Query: 121 gtgtaatacttgagatattataagtcttttaggcttcgtaggttcaaatcctacatcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4268 gtgtaatacttgagatattataagtcttttaggcttcgtaggttcaaatcctacatcatt 4209
Query: 181 cgtatataatataatactaatatatagtattatatattasccacgccacctgatactatt 240
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 4208 cgtatataatataatactaatatatagtattatatattacccacgccacctgatactatt 4149
Query: 241 agtatcaggtggctttaataattcattgaattatttacgaaatatatatatyatatatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4148 agtatcaggtggctttaataattcattgaattatttacgaaatatatatattatatatat 4089
Query: 301 ta 302
||
Sbjct: 4088 ta 4087
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2781
Number of Sequences: 1807
Number of extensions: 2781
Number of successful extensions: 80
Number of sequences better than 1.0e-20: 1
length of query: 302
length of database: 10,358,551
effective HSP length: 16
effective length of query: 286
effective length of database: 10,329,639
effective search space: 2954276754
effective search space used: 2954276754
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.1 bits)